Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0796Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase-like protein; KEGG: dde:Dde_1973 HIT family protein. (135 aa)    
Predicted Functional Partners:
Cmaq_1553
PFAM: histidine triad (HIT) protein; KEGG: hbu:Hbut_0970 universally conserved protein.
  
  
 
0.914
Cmaq_0274
TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; KEGG: afu:AF1667 sulfate adenylyltransferase.
    
  0.900
tfb
Transcription factor TFIIB cyclin-related; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
     
 0.795
Cmaq_1766
PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: pis:Pisl_0144 glutamate--ammonia ligase.
  
   0.599
tbp
2-alkenal reductase; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
   
  0.570
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription; Belongs to the sirtuin family. Class U subfamily.
  
 
  0.544
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: sso:SSO0090 Lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.533
Cmaq_1949
PFAM: histone deacetylase superfamily; KEGG: pis:Pisl_0381 histone deacetylase superfamily.
   
  0.478
Cmaq_0798
Hypothetical protein.
       0.444
Cmaq_0822
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: Hedgehog/intein hint domain protein; DEAD-like helicases; KEGG: pai:PAE1611 helicase, possible DNA repair rad25.
 
 
  0.418
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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