node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cmaq_0242 | Cmaq_0449 | Cmaq_0242 | Cmaq_0449 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
Cmaq_0242 | Cmaq_0620 | Cmaq_0242 | Cmaq_0620 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: pai:PAE2991 hypothetical protein. | 0.916 |
Cmaq_0242 | Cmaq_0822 | Cmaq_0242 | Cmaq_0822 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: Hedgehog/intein hint domain protein; DEAD-like helicases; KEGG: pai:PAE1611 helicase, possible DNA repair rad25. | 0.943 |
Cmaq_0242 | Cmaq_1166 | Cmaq_0242 | Cmaq_1166 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | PFAM: RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; KEGG: pis:Pisl_0697 RNA polymerase, insert. | 0.999 |
Cmaq_0242 | Cmaq_1632 | Cmaq_0242 | Cmaq_1632 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | PFAM: Zinc finger TFIIB-type domain protein; Transcription factor TFIIB cyclin-related; KEGG: tko:TK1280 transcription initiation factor IIB. | 0.880 |
Cmaq_0242 | rpoH | Cmaq_0242 | Cmaq_1855 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | RNA polymerase Rpb5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.999 |
Cmaq_0242 | rpoN | Cmaq_0242 | Cmaq_1572 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | RNA polymerase, N/8 Kd subunits; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.999 |
Cmaq_0242 | tbp | Cmaq_0242 | Cmaq_1206 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | 2-alkenal reductase; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.924 |
Cmaq_0242 | tfb | Cmaq_0242 | Cmaq_0797 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | Transcription factor TFIIB cyclin-related; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.880 |
Cmaq_0242 | tfe | Cmaq_0242 | Cmaq_1388 | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] | 0.966 |
Cmaq_0449 | Cmaq_0242 | Cmaq_0449 | Cmaq_0242 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SMART: RNA polymerase Rbp10; KEGG: pis:Pisl_0899 RNA polymerase Rbp10. | 0.999 |
Cmaq_0449 | Cmaq_0620 | Cmaq_0449 | Cmaq_0620 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: pai:PAE2991 hypothetical protein. | 0.935 |
Cmaq_0449 | Cmaq_0822 | Cmaq_0449 | Cmaq_0822 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: Hedgehog/intein hint domain protein; DEAD-like helicases; KEGG: pai:PAE1611 helicase, possible DNA repair rad25. | 0.944 |
Cmaq_0449 | Cmaq_1166 | Cmaq_0449 | Cmaq_1166 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PFAM: RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type; KEGG: pis:Pisl_0697 RNA polymerase, insert. | 0.999 |
Cmaq_0449 | Cmaq_1632 | Cmaq_0449 | Cmaq_1632 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PFAM: Zinc finger TFIIB-type domain protein; Transcription factor TFIIB cyclin-related; KEGG: tko:TK1280 transcription initiation factor IIB. | 0.873 |
Cmaq_0449 | rpoH | Cmaq_0449 | Cmaq_1855 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase Rpb5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.999 |
Cmaq_0449 | rpoN | Cmaq_0449 | Cmaq_1572 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase, N/8 Kd subunits; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.999 |
Cmaq_0449 | tbp | Cmaq_0449 | Cmaq_1206 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 2-alkenal reductase; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.945 |
Cmaq_0449 | tfb | Cmaq_0449 | Cmaq_0797 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription factor TFIIB cyclin-related; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.894 |
Cmaq_0449 | tfe | Cmaq_0449 | Cmaq_1388 | RNA polymerase Rpb2 domain 6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] | 0.965 |