STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0841TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: pab:PAB2077 hypothetical protein. (431 aa)    
Predicted Functional Partners:
Cmaq_0842
Resolvase domain; PFAM: regulatory protein MerR; Resolvase domain; KEGG: pab:PAB2076 resolvase related protein.
 
  
 0.975
Cmaq_0840
PFAM: monooxygenase FAD-binding; KEGG: mac:MA3894 bacteriochlorophyll synthase.
       0.773
Cmaq_0843
DNA-(apurinic or apyrimidinic site) lyase; PFAM: N-glycosylase/DNA lyase, archaea; KEGG: pai:PAE2237 hypothetical protein.
       0.705
Cmaq_0844
KEGG: pis:Pisl_1695 hypothetical protein.
       0.705
Cmaq_0845
PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: tpe:Tpen_0864 peptidase M50.
       0.705
Cmaq_0313
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO3010 hypothetical protein.
  
     0.662
Cmaq_0860
KEGG: sso:SSO0503 hypothetical protein.
  
     0.661
Cmaq_1182
KEGG: sto:ST2467 hypothetical protein.
  
     0.622
Cmaq_1791
PFAM: UspA domain protein; KEGG: sso:SSO0529 hypothetical protein.
  
     0.577
Cmaq_0507
ABC-type molybdate transport system periplasmic component-like protein; KEGG: pfu:PF0080 putative sulfate transport system substrate-binding protein.
  
     0.548
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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