STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cmaq_0845PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: tpe:Tpen_0864 peptidase M50. (418 aa)    
Predicted Functional Partners:
Cmaq_0844
KEGG: pis:Pisl_1695 hypothetical protein.
       0.809
uppS
Undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
 
  
 0.797
Cmaq_0843
DNA-(apurinic or apyrimidinic site) lyase; PFAM: N-glycosylase/DNA lyase, archaea; KEGG: pai:PAE2237 hypothetical protein.
       0.779
Cmaq_0840
PFAM: monooxygenase FAD-binding; KEGG: mac:MA3894 bacteriochlorophyll synthase.
 
    0.748
Cmaq_0841
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: pab:PAB2077 hypothetical protein.
       0.705
Cmaq_0842
Resolvase domain; PFAM: regulatory protein MerR; Resolvase domain; KEGG: pab:PAB2076 resolvase related protein.
       0.705
Cmaq_0629
Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.661
Cmaq_1136
TIGRFAM: DNA-directed RNA polymerase; PFAM: RNA polymerase Rpb7-like; SMART: RNA binding S1 domain protein; KEGG: pis:Pisl_0922 RNA polymerase Rpb7-like protein.
  
     0.573
Cmaq_0137
PFAM: Pyrrolo-quinoline quinone; KEGG: sto:ST2402 hypothetical outer membrane protein.
   
    0.548
map
Methionine aminopeptidase, type II; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase archaeal type 2 subfamily.
 
  
 0.540
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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