STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Cmaq_0852KEGG: pai:PAE2614 nitrate reductase gamma subunit. (261 aa)    
Predicted Functional Partners:
Cmaq_0851
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chy:CHY_2403 putative reductase, iron-sulfur cluster-binding subunit.
 
 0.995
Cmaq_0853
PFAM: nitrite and sulphite reductase 4Fe-4S region; KEGG: pis:Pisl_0171 sulfite reductase, dissimilatory-type alpha subunit.
 
  
 0.994
Cmaq_0854
TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pai:PAE2571 sulfite reductase beta subunit.
 
  
 0.988
Cmaq_0272
TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rma:Rmag_0087 adenylylsulfate reductase, beta subunit.
  
  
 0.953
Cmaq_0273
TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: afu:AF1670 adenylylsulfate reductase, subunit A.
 
  
 0.952
Cmaq_0290
PFAM: nitrite and sulphite reductase 4Fe-4S region; KEGG: tth:TTC0313 ferredoxin-nitrite reductase.
     
 0.914
Cmaq_0486
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tpe:Tpen_1802 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
  0.901
Cmaq_0782
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pai:PAE2834 hypothetical protein.
    
  0.900
Cmaq_1123
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: pis:Pisl_0611 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
  0.900
Cmaq_1364
Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pis:Pisl_0881 cystathionine gamma-synthase.
     
  0.900
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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