STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0863PFAM: Protein of unknown function DUF460; KEGG: pis:Pisl_0690 protein of unknown function DUF460. (639 aa)    
Predicted Functional Partners:
Cmaq_1049
PFAM: protein of unknown function RIO1; RIO2 kinase, winged helix-like; KEGG: hbu:Hbut_0072 RIO-like serine/threonine kinase.
 
     0.776
Cmaq_0735
TIGRFAM: putative adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: pis:Pisl_1114 putative adenylyl cyclase CyaB.
  
     0.606
Cmaq_1687
PFAM: helix-turn-helix domain protein; KEGG: pis:Pisl_1655 transcriptional regulator, XRE family.
 
     0.560
Cmaq_0112
PFAM: helix-turn-helix domain protein; KEGG: pis:Pisl_1076 transcriptional regulator, XRE family.
  
     0.545
hjc
Resolvase, Holliday junction-type; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products; Belongs to the Holliday junction resolvase Hjc family.
  
     0.544
Cmaq_0175
PFAM: protein of unknown function DUF814; KEGG: pai:PAE3259 hypothetical protein.
 
     0.527
Cmaq_1034
KEGG: sto:ST0179 hypothetical protein.
  
     0.520
Cmaq_0862
Hypothetical protein.
       0.516
Cmaq_1727
PFAM: Protein of unknown function DUF371; KEGG: sai:Saci_0031 hypothetical protein.
  
     0.512
Cmaq_1785
PFAM: GHMP kinase; KEGG: pis:Pisl_1364 hypothetical protein.
  
     0.510
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.