Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0915KEGG: tma:TM1074 hypothetical protein. (994 aa)    
Predicted Functional Partners:
Cmaq_0172
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_5559 alpha-L-rhamnosidase.
  
     0.591
Cmaq_0916
Hypothetical protein.
       0.537
Cmaq_0700
PFAM: ADP-ribosylation/Crystallin J1; KEGG: sma:SAV1919 hypothetical protein.
  
     0.519
Cmaq_0914
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sto:ST2577 alcohol dehydrogenase.
       0.467
Cmaq_0234
KEGG: bad:BAD_1588 hypothetical protein.
  
     0.445
Cmaq_0432
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: tte:TTE1949 sugar phosphate isomerase/epimerase.
  
     0.433
Cmaq_0602
PFAM: glycosyl hydrolase 38 domain protein; KEGG: aba:Acid345_0644 glycosyl hydrolases 38-like.
  
     0.402
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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