Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Score
Cmaq_0930PFAM: PBS lyase HEAT domain protein repeat-containing protein; Peptidase M1 membrane alanine aminopeptidase; KEGG: pis:Pisl_1642 peptidase M1, membrane alanine aminopeptidase. (835 aa)    
Predicted Functional Partners:
Cmaq_1271
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: ape:APE_0137 gamma-glutamyltranspeptidase.
  
 
 0.907
Cmaq_0278
PFAM: PBS lyase HEAT domain protein repeat-containing protein; Peptidase M1 membrane alanine aminopeptidase; KEGG: pis:Pisl_1642 peptidase M1, membrane alanine aminopeptidase.
  
  
 
0.902
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.849
Cmaq_0127
PFAM: aminotransferase class I and II; KEGG: pis:Pisl_0770 aminotransferase, class I and II.
    
 0.815
Cmaq_0323
PFAM: aminotransferase class I and II; KEGG: ape:APE_2248.1 aspartate aminotransferase.
    
 0.815
Cmaq_0643
PFAM: aminotransferase class I and II; KEGG: pis:Pisl_0770 aminotransferase, class I and II.
    
 0.815
Cmaq_1088
PFAM: aminotransferase class I and II; KEGG: ape:APE_0674.1 aspartate aminotransferase.
    
 0.815
fusA
Translation elongation factor aEF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF [...]
  
 
 0.683
Cmaq_0929
PFAM: Protein of unknown function DUF701, zinc-binding putative; KEGG: pis:Pisl_0444 hypothetical protein.
       0.655
Cmaq_0931
PFAM: fumarate lyase; KEGG: sto:ST2023 fumarate hydratase.
   
   0.588
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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