STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0931PFAM: fumarate lyase; KEGG: sto:ST2023 fumarate hydratase. (441 aa)    
Predicted Functional Partners:
Cmaq_1869
TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pai:PAE0716 succinate dehydrogenase flavoprotein subunit.
 0.993
mdh
Lactate/malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily.
  
 0.992
Cmaq_0306
TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; KEGG: pas:Pars_2234 2-methylcitrate synthase/citrate synthase II.
  
 0.991
Cmaq_1355
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_0670 succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 0.986
Cmaq_0626
TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: ape:APE_1618.1 aconitate hydratase.
  
 0.972
Cmaq_1356
KEGG: hbu:Hbut_0155 succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
  
 
 0.963
Cmaq_1579
TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; KEGG: pai:PAE2132 fumarate hydratase class I alpha subunit.
  
 
 0.958
Cmaq_1616
TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: pai:PAE2131 fumarate hydratase class I beta subunit.
  
 
 0.958
Cmaq_0373
Malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: pai:PAE1688 malate oxidoreductase (mae).
  
 
 0.947
Cmaq_1357
KEGG: hbu:Hbut_0156 hypothetical protein.
  
 
 0.925
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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