Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Cmaq_0948PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bcl:ABC3437 hypothetical protein. (272 aa)    
Predicted Functional Partners:
Cmaq_0947
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pfu:PF0766 putative dehydrogenase.
  
  
 0.693
Cmaq_1662
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: tpe:Tpen_1349 xylose isomerase domain protein TIM barrel.
  
     0.659
Cmaq_1053
KEGG: sth:STH1938 hypothetical protein.
  
     0.559
Cmaq_1622
KEGG: rba:RB6095 hypothetical protein.
  
     0.553
Cmaq_0649
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_3671 putative D-tagatose 3-epimerase.
 
     0.522
Cmaq_0433
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sso:SSO3029 hypothetical protein.
  
     0.449
Cmaq_0700
PFAM: ADP-ribosylation/Crystallin J1; KEGG: sma:SAV1919 hypothetical protein.
 
   
 0.424
Cmaq_1497
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bcl:ABC0577 oxidoreductase.
 
  
 0.401
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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