STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0964PFAM: amino acid permease-associated region; KEGG: sso:SSO3224 amino acid transporter related protein. (463 aa)    
Predicted Functional Partners:
Cmaq_0603
PFAM: major facilitator superfamily MFS_1; KEGG: sto:ST1852 hypothetical multidrug resistance protein.
  
     0.712
Cmaq_0148
PFAM: major facilitator superfamily MFS_1; KEGG: sto:ST1852 hypothetical multidrug resistance protein.
  
     0.710
Cmaq_0313
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO3010 hypothetical protein.
  
     0.673
Cmaq_1690
Hypothetical protein; KEGG: tvo:TVN0904 glycosyltransferase involved in cell wall biogenesis.
  
   0.657
Cmaq_1589
PFAM: Peptidase S53 propeptide; KEGG: sto:ST2492 hypothetical pseudomonapepsin.
  
     0.625
Cmaq_0965
Hypothetical protein.
       0.592
mvk
Mevalonate kinase; Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)- mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids; Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
       0.592
Cmaq_1089
PFAM: amidinotransferase; KEGG: tac:Ta0987 arginine deiminase related protein.
 
  
 0.551
Cmaq_0860
KEGG: sso:SSO0503 hypothetical protein.
  
     0.527
Cmaq_1292
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO0992 transport conserved hypothetical protein.
 
   0.519
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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