Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0973KEGG: pis:Pisl_0536 AAA family ATPase, CDC48 subfamily; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein; AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. (852 aa)    
Predicted Functional Partners:
Cmaq_1949
PFAM: histone deacetylase superfamily; KEGG: pis:Pisl_0381 histone deacetylase superfamily.
 
 
 0.844
Cmaq_1147
PFAM: zinc finger RanBP2-type; Ribosomal protein L40e; KEGG: tpe:Tpen_0296 ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.777
tmcA
Protein of unknown function DUF699 ATPase putative; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP).
 
  
 0.769
Cmaq_1132
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: pis:Pisl_1102 serine/threonine protein kinase.
   
 0.727
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  0.727
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
  
 0.708
Cmaq_0429
PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase.
    
 
 0.628
Cmaq_1856
PFAM: heat shock protein Hsp20; KEGG: pai:PAE3172 small heat shock protein, HSP20 homolog, conjectural; Belongs to the small heat shock protein (HSP20) family.
 
 
 0.601
Cmaq_0044
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sto:ST2123 hypothetical thioredoxin.
  
 0.595
Cmaq_1343
TIGRFAM: glutaredoxin-like domain protein; PFAM: Thioredoxin domain; KEGG: pai:PAE2366 glutaredoxin-like protein.
  
 0.595
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.