Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0975KEGG: pai:PAE3486 hypothetical protein. (220 aa)    
Predicted Functional Partners:
Cmaq_0976
PFAM: deoxyhypusine synthase; KEGG: pai:PAE3487 deoxyhypusine synthase.
  
    0.860
Cmaq_0977
PFAM: glycosyl transferase family 4; KEGG: pis:Pisl_0784 glycosyl transferase, family 4.
       0.731
Cmaq_0978
Hypothetical protein.
       0.497
rps5
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.
    
 0.493
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.466
Cmaq_0427
TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: afu:AF1829 F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative.
    
 0.421
Cmaq_1945
PFAM: Ribosomal protein S26E; KEGG: pis:Pisl_0820 ribosomal protein S26.
 
  0.412
Cmaq_0428
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: afu:AF1830 F420H2:quinone oxidoreductase, 45 kDa subunit.
    
 0.402
Cmaq_0973
KEGG: pis:Pisl_0536 AAA family ATPase, CDC48 subfamily; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein; AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
  
   0.400
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.