node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cmaq_0397 | Cmaq_1003 | Cmaq_0397 | Cmaq_1003 | PFAM: inositol monophosphatase; KEGG: mth:MTH871 inositol-1-monophosphatase. | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | 0.629 |
Cmaq_0397 | tgtA | Cmaq_0397 | Cmaq_0024 | PFAM: inositol monophosphatase; KEGG: mth:MTH871 inositol-1-monophosphatase. | tRNA-guanine transglycosylase, various specificities; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. | 0.438 |
Cmaq_1001 | Cmaq_1003 | Cmaq_1001 | Cmaq_1003 | PFAM: aspartate/glutamate/uridylate kinase; KEGG: pho:PH1623 hypothetical protein. | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | 0.551 |
Cmaq_1003 | Cmaq_0397 | Cmaq_1003 | Cmaq_0397 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | PFAM: inositol monophosphatase; KEGG: mth:MTH871 inositol-1-monophosphatase. | 0.629 |
Cmaq_1003 | Cmaq_1001 | Cmaq_1003 | Cmaq_1001 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | PFAM: aspartate/glutamate/uridylate kinase; KEGG: pho:PH1623 hypothetical protein. | 0.551 |
Cmaq_1003 | Cmaq_1004 | Cmaq_1003 | Cmaq_1004 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | PFAM: amino acid-binding ACT domain protein. | 0.610 |
Cmaq_1003 | Cmaq_1255 | Cmaq_1003 | Cmaq_1255 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | PFAM: PP-loop domain protein; KEGG: pis:Pisl_1017 PP-loop domain protein. | 0.576 |
Cmaq_1003 | Cmaq_1718 | Cmaq_1003 | Cmaq_1718 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | Conserved protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.700 |
Cmaq_1003 | hflX | Cmaq_1003 | Cmaq_0139 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | GTP-binding protein HSR1-related; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.546 |
Cmaq_1003 | rrp4 | Cmaq_1003 | Cmaq_0366 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | KH type 1 domain protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.691 |
Cmaq_1003 | rrp41 | Cmaq_1003 | Cmaq_0167 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | Exosome complex exonuclease 1; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.712 |
Cmaq_1003 | tgtA | Cmaq_1003 | Cmaq_0024 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | tRNA-guanine transglycosylase, various specificities; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. | 0.594 |
Cmaq_1003 | thiI | Cmaq_1003 | Cmaq_0014 | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.633 |
Cmaq_1004 | Cmaq_1003 | Cmaq_1004 | Cmaq_1003 | PFAM: amino acid-binding ACT domain protein. | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | 0.610 |
Cmaq_1255 | Cmaq_1003 | Cmaq_1255 | Cmaq_1003 | PFAM: PP-loop domain protein; KEGG: pis:Pisl_1017 PP-loop domain protein. | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | 0.576 |
Cmaq_1255 | tgtA | Cmaq_1255 | Cmaq_0024 | PFAM: PP-loop domain protein; KEGG: pis:Pisl_1017 PP-loop domain protein. | tRNA-guanine transglycosylase, various specificities; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. | 0.418 |
Cmaq_1255 | thiI | Cmaq_1255 | Cmaq_0014 | PFAM: PP-loop domain protein; KEGG: pis:Pisl_1017 PP-loop domain protein. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.497 |
Cmaq_1718 | Cmaq_1003 | Cmaq_1718 | Cmaq_1003 | Conserved protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | 0.700 |
hflX | Cmaq_1003 | Cmaq_0139 | Cmaq_1003 | GTP-binding protein HSR1-related; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: pis:Pisl_0345 RNA modification enzyme, MiaB family. | 0.546 |
hflX | tgtA | Cmaq_0139 | Cmaq_0024 | GTP-binding protein HSR1-related; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | tRNA-guanine transglycosylase, various specificities; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. | 0.450 |