STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1010PFAM: protein of unknown function DUF162; KEGG: pis:Pisl_1348 protein of unknown function DUF162. (382 aa)    
Predicted Functional Partners:
Cmaq_0350
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pis:Pisl_1346 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 
 0.913
Cmaq_0574
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_0176 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.759
Cmaq_1011
PFAM: glycoside hydrolase family 37; KEGG: gfo:orf1168 trehalase-like protein.
       0.753
Cmaq_1348
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pis:Pisl_1721 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 
 0.747
Cmaq_0270
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_1345 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 
 0.744
Cmaq_0851
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chy:CHY_2403 putative reductase, iron-sulfur cluster-binding subunit.
  
 
 0.712
Cmaq_0271
Hypothetical protein; KEGG: afu:AF0661 heterodisulfide reductase, subunit E, putative.
  
 
 0.708
Cmaq_1009
Hypothetical protein.
       0.536
Cmaq_1012
KEGG: pis:Pisl_1281 hypothetical protein.
       0.499
Cmaq_0269
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: pto:PTO1045 (S)-2-hydroxy-acid oxidase chain D.
  
  
 0.475
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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