STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1011PFAM: glycoside hydrolase family 37; KEGG: gfo:orf1168 trehalase-like protein. (581 aa)    
Predicted Functional Partners:
Cmaq_1332
PFAM: glycosyl transferase group 1; KEGG: tpe:Tpen_1778 glycosyl transferase, group 1.
  
 
 0.955
Cmaq_1010
PFAM: protein of unknown function DUF162; KEGG: pis:Pisl_1348 protein of unknown function DUF162.
       0.753
Cmaq_0090
PFAM: glycoside hydrolase 15-related; KEGG: mja:MJ1610 glucoamylase.
 
   
 0.648
Cmaq_0171
Alpha-amylase; PFAM: glycoside hydrolase family 57; KEGG: pis:Pisl_0969 alpha-amylase.
  
  
 0.592
Cmaq_0103
PFAM: glycosidase PH1107-related; KEGG: tpe:Tpen_1153 glycosidase, PH1107-related.
  
  
 0.573
Cmaq_1009
Hypothetical protein.
       0.519
Cmaq_1012
KEGG: pis:Pisl_1281 hypothetical protein.
       0.515
Cmaq_0602
PFAM: glycosyl hydrolase 38 domain protein; KEGG: aba:Acid345_0644 glycosyl hydrolases 38-like.
 
    0.500
Cmaq_1386
Beta-glucuronidase; PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sso:SSO3036 beta-glucuronidase.
 
   
 0.475
Cmaq_1213
PFAM: glycosyl transferase group 1; KEGG: pis:Pisl_1466 glycosyl transferase, group 1.
 
 
 0.460
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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