STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cmaq_1029KEGG: sso:SSO2847 Sugar-binding periplasmic protein. (491 aa)    
Predicted Functional Partners:
Cmaq_1030
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2848 ABC transporter, permease (glucose).
 
 0.999
Cmaq_1031
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2849 ABC transporter, permease (glucose).
 
 0.999
Cmaq_0800
KEGG: pai:PAE3088 oligopeptide binding protein, putative.
  
   
 0.592
Cmaq_1411
PFAM: extracellular solute-binding protein family 5; KEGG: sso:SSO3043 ABC transporter, peptide binding protein.
  
  
 0.525
Cmaq_1315
PFAM: extracellular solute-binding protein family 5; KEGG: sso:SSO3043 ABC transporter, peptide binding protein.
  
  
 0.522
Cmaq_0389
PFAM: extracellular solute-binding protein family 5; KEGG: sso:SSO3043 ABC transporter, peptide binding protein.
  
  
 0.513
Cmaq_0764
PFAM: ABC-2 type transporter; KEGG: sto:ST0755 hypothetical protein.
  
   
 0.499
Cmaq_1626
PFAM: glycoside hydrolase 15-related; KEGG: sto:ST1107 hypothetical protein.
 
    0.486
Cmaq_1185
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO2746 hypothetical protein.
 
     0.484
Cmaq_0778
PFAM: extracellular solute-binding protein family 5; KEGG: sso:SSO2669 ABC transporter, periplasmic component.
  
  
 0.478
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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