STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1069PFAM: thiamineS protein; Ubiquitin related modifier 1; KEGG: pis:Pisl_1827 hypothetical protein. (96 aa)    
Predicted Functional Partners:
Cmaq_1867
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: pai:PAE1056 ThiF/MoeB/HesA family protein.
  
 0.968
Cmaq_0246
TIGRFAM: MoaD family protein; PFAM: thiamineS protein; Ubiquitin related modifier 1; KEGG: pai:PAE2135 hypothetical protein.
  
  
 
0.902
Cmaq_0106
PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: sai:Saci_0905 molybdenum cofactor biosynthesis protein C.
  
  
 0.856
Cmaq_1068
TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pis:Pisl_1828 methylated-DNA--protein-cysteine methyltransferase.
       0.798
Cmaq_1070
Hypothetical protein.
       0.702
moaA
Putative molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
  
  
 0.697
Cmaq_1593
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sto:ST1380 cysteine synthase.
  
 
 0.680
Cmaq_1734
TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: pai:PAE0969 molybdenum cofactor biosynthesis protein (moaB).
  
  
 0.624
thiI
Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
  
 0.443
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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