STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1092KEGG: pis:Pisl_0485 hypothetical protein. (233 aa)    
Predicted Functional Partners:
Cmaq_1093
PFAM: CoA-binding domain protein; KEGG: pai:PAE3250 hypothetical protein.
 
 0.999
Cmaq_0256
TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: pis:Pisl_0270 acetate--CoA ligase.
    
 0.946
Cmaq_1071
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: sso:SSO2815 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
  
 0.930
Cmaq_1712
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: hbu:Hbut_0730 ketoisovalerate oxidoreductase, alpha subunit.
  
 0.930
Cmaq_1861
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: pis:Pisl_1232 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 0.930
Cmaq_1242
KEGG: pai:PAE2183 acetyl-CoA C-acyltransferase.
 
 
  0.928
Cmaq_1941
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: pis:Pisl_1301 acetyl-CoA acetyltransferase.
  
 
  0.918
Cmaq_1710
TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: hbu:Hbut_0732 pyruvate oxidoreductase gamma subunit.
    
 0.916
Cmaq_1863
TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tko:TK1978 pyruvate/2-oxoisovalerate: ferredoxin oxidoreductases, common gamma subunit.
    
 0.916
Cmaq_0785
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sto:ST2433 hypothetical 2-oxoacid--ferredoxin oxidoreductase beta subunit.
    
 0.914
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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