Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1097PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sto:ST0619 3-hydroxyisobutyrate dehydrogenase. (295 aa)    
Predicted Functional Partners:
Cmaq_1806
PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rha:RHA1_ro08845 probable 3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.920
Cmaq_0209
PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sso:SSO1560 3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.911
Cmaq_0306
TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; KEGG: pas:Pars_2234 2-methylcitrate synthase/citrate synthase II.
  
 
 0.840
Cmaq_0256
TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: pis:Pisl_0270 acetate--CoA ligase.
  
 
 0.835
Cmaq_1092
KEGG: pis:Pisl_0485 hypothetical protein.
    
  0.812
Cmaq_1093
PFAM: CoA-binding domain protein; KEGG: pai:PAE3250 hypothetical protein.
    
  0.812
Cmaq_0421
PFAM: coenzyme A transferase; KEGG: pis:Pisl_0263 coenzyme A transferase.
    
  0.800
Cmaq_0809
Transketolase central region; PFAM: Transketolase domain protein; Transketolase central region; KEGG: sai:Saci_0181 pyridine-binding domain transketolase.
       0.614
Cmaq_1711
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pai:PAE3276 2-ketoacid ferredoxin oxidoreductase delta subunit.
    
  0.610
Cmaq_1862
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: hbu:Hbut_0668 pyruvate synthase subunit PorD.
    
  0.610
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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