STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1109PFAM: SpoVT/AbrB domain protein; KEGG: pis:Pisl_1831 phosphate uptake regulator, PhoU. (331 aa)    
Predicted Functional Partners:
Cmaq_1830
Protein of unknown function DUF650; Involved in DNA damage repair.
  
     0.518
Cmaq_1128
Protein of unknown function DUF650; Involved in DNA damage repair.
  
     0.514
Cmaq_1550
KEGG: pai:PAE3574 hypothetical protein.
 
     0.491
ribK
Protein of unknown function DUF120; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
  
     0.473
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.471
Cmaq_1785
PFAM: GHMP kinase; KEGG: pis:Pisl_1364 hypothetical protein.
 
     0.460
Cmaq_0355
PFAM: GCN5-related N-acetyltransferase; KEGG: pai:PAE1143 conserved protein (acetyltransferase).
  
    0.431
Cmaq_0503
TIGRFAM: peptidase S26B, signal peptidase; KEGG: tpe:Tpen_0863 putative phage repressor.
  
    0.430
Cmaq_1647
TIGRFAM: cytidyltransferase-related domain; nicotinamide-nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: pis:Pisl_1561 nicotinamide-nucleotide adenylyltransferase.
 
  
 0.429
Cmaq_1751
KEGG: pai:PAE1446 hypothetical protein.
  
     0.422
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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