Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1143PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO3149 permease, putative. (399 aa)    
Predicted Functional Partners:
Cmaq_1609
PFAM: major facilitator superfamily MFS_1; KEGG: sai:Saci_1789 hypothetical protein.
 
     0.658
Cmaq_1142
KEGG: sai:Saci_1237 hypothetical protein.
       0.648
Cmaq_1144
TIGRFAM: pyridoxal phosphate-dependent enzyme, putative; KEGG: tac:Ta0673 hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.572
Cmaq_0764
PFAM: ABC-2 type transporter; KEGG: sto:ST0755 hypothetical protein.
  
     0.502
fni-2
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
   0.496
Cmaq_1185
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO2746 hypothetical protein.
  
     0.463
Cmaq_1139
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sto:ST2561 hypothetical DgoA protein.
       0.451
Cmaq_1140
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: sso:SSO1259 altronate hydrolase.
       0.451
Cmaq_1141
PFAM: SAF domain protein; KEGG: sto:ST2559 altronate hydrolase.
       0.451
Cmaq_1138
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pto:PTO0380 hypothetical membrane protein.
       0.443
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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