Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1147PFAM: zinc finger RanBP2-type; Ribosomal protein L40e; KEGG: tpe:Tpen_0296 ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. (51 aa)    
Predicted Functional Partners:
rps24e
Ribosomal protein S24E-like protein; KEGG: pis:Pisl_1895 transcriptional regulator, fis family; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.998
rpl19e
Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.998
rpl32e
PFAM: Ribosomal protein L32e; KEGG: pai:PAE2099 ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.
   
 0.998
rps6e
PFAM: Ribosomal protein S6e; KEGG: pai:PAE1505 ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.998
rpl31e
PFAM: Ribosomal protein L31e; KEGG: pai:PAE3095 ribosomal protein L31; Belongs to the ribosomal protein L31e family.
   
 0.998
rpl24e
Ribosomal protein L24E; Binds to the 23S rRNA.
  
 0.998
rpl18e
PFAM: ribosomal protein L15; KEGG: pis:Pisl_0696 ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL18 family.
  
 0.998
rpl44e
Ribosomal protein L44E; Binds to the 23S rRNA.
   
 0.998
rps4e
PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E, central; KEGG: pis:Pisl_0560 ribosomal protein S4E, central; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.998
Cmaq_1892
PFAM: Ribosomal protein L15e; KEGG: ape:APE_1452 50S ribosomal protein L15e.
   
 0.998
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.