Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1162PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1140 hypothetical protein. (395 aa)    
Predicted Functional Partners:
Cmaq_0817
PFAM: amino acid permease-associated region; KEGG: sso:SSO2549 amino acid transporter, putative.
  
     0.624
Cmaq_0017
KEGG: sto:ST2481 hypothetical protein.
  
     0.597
Cmaq_1992
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sso:SSO1328 restriction endonuclease related protein.
 
     0.577
Cmaq_0205
KEGG: sso:SSO3189 amino acid transporter, putative.
  
     0.547
Cmaq_1399
KEGG: sso:SSO1960 hypothetical protein.
 
 
   0.476
Cmaq_0964
PFAM: amino acid permease-associated region; KEGG: sso:SSO3224 amino acid transporter related protein.
 
   0.445
Cmaq_1708
PFAM: amino acid permease-associated region; KEGG: sto:ST1032 hypothetical protein.
  
     0.439
Cmaq_0030
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; KEGG: sso:SSO0683 hypothetical protein.
 
     0.420
Cmaq_1589
PFAM: Peptidase S53 propeptide; KEGG: sto:ST2492 hypothetical pseudomonapepsin.
 
     0.415
ppcA
Protein of unknown function DUF557; Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. Belongs to the PEPCase type 2 family.
  
     0.407
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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