STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1209PFAM: molybdopterin binding domain; KEGG: tvo:TVN0585 competence/damage-inducible protein CinA N-terminal domain; Belongs to the CinA family. (257 aa)    
Predicted Functional Partners:
Cmaq_1924
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sso:SSO0556 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putataive; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.670
Cmaq_1172
TIGRFAM: isopropylmalate/isohomocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: sso:SSO0723 3-isopropylmalate dehydrogenase.
      0.663
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
 
  
 0.609
Cmaq_1210
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pai:PAE0315 ABC-2 type transport system ATP-binding protein.
       0.542
Cmaq_1211
KEGG: pis:Pisl_1969 ABC-2 type transporter.
       0.532
Cmaq_0248
PFAM: protein of unknown function DUF59; KEGG: pai:PAE2055 hypothetical protein.
       0.480
Cmaq_1001
PFAM: aspartate/glutamate/uridylate kinase; KEGG: pho:PH1623 hypothetical protein.
       0.477
gap
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase; KEGG: sso:SSO0528 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase.
 
     0.439
mvk
Mevalonate kinase; Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)- mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids; Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
       0.417
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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