Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1229PFAM: oxidoreductase molybdopterin binding; KEGG: pai:PAE0389 sulfite oxidase, conjectural. (220 aa)    
Predicted Functional Partners:
Cmaq_1230
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pai:PAE0025 3-ketoacyl-(acyl-carrier-protein) reductase.
   
   0.586
Cmaq_0031
PFAM: Endoribonuclease L-PSP; KEGG: hbu:Hbut_0217 YjgH/F family protein - putative translation initiation inhibitor.
  
  
 0.487
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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