STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1237PFAM: UbiA prenyltransferase; KEGG: tma:TM1528 1,4-dihydroxy-2-naphthoate octaprenyltransferase. (334 aa)    
Predicted Functional Partners:
Cmaq_0921
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; KEGG: pai:PAE2338 ubiquinone/menaquinone biosynthesis methyltransferase (ubiE), conjectural.
 
  
 0.953
Cmaq_0412
TIGRFAM: 3-hydroxy-3-methylglutaryl Coenzyme A reductase; PFAM: hydroxymethylglutaryl-coenzyme A reductase; KEGG: pai:PAE2182 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase); Belongs to the HMG-CoA reductase family.
   
 
 0.701
Cmaq_1236
TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: pis:Pisl_1757 UbiD family decarboxylase.
       0.580
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
     
 0.508
fni-2
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
     
 0.508
Cmaq_1238
PFAM: beta-lactamase; KEGG: tte:TTE0213 beta-lactamase class C and other penicillin binding proteins.
       0.505
Cmaq_0701
KEGG: pai:PAE2936 hypothetical protein.
 
 
 
 0.443
Cmaq_0500
PFAM: Polyprenyl synthetase; KEGG: mbu:Mbur_1235 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
   
 0.415
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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