STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1248PFAM: transposase IS605 OrfB; Protein of unknown function DUF1225; KEGG: sso:SSO0842 transposase ISC1476. (440 aa)    
Predicted Functional Partners:
Cmaq_1908
Permease; KEGG: sso:SSO3021 Permease.
  
     0.729
Cmaq_0859
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1361 transport membrane protein (permease).
  
     0.684
Cmaq_0817
PFAM: amino acid permease-associated region; KEGG: sso:SSO2549 amino acid transporter, putative.
  
     0.668
Cmaq_1061
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: sso:SSO1974 hypothetical protein.
  
     0.667
Cmaq_1176
KEGG: sso:SSO1345 hypothetical protein.
  
     0.663
Cmaq_1638
PFAM: protein of unknown function DUF608; KEGG: sso:SSO2674 hypothetical protein.
 
     0.629
Cmaq_1350
KEGG: sai:Saci_1158 hypothetical protein.
  
     0.611
Cmaq_0386
TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: sso:SSO1341 transposase ISC1316.
  
     0.601
Cmaq_1249
PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_3709 major facilitator superfamily MFS_1 transporter.
       0.588
Cmaq_1494
PFAM: extracellular solute-binding protein family 5; KEGG: sto:ST2534 putative peptide transport system substrate-binding protein.
  
     0.586
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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