STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1323PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2618 Dipeptide ABC transporter permease protein. (341 aa)    
Predicted Functional Partners:
Cmaq_1324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2617 Dipeptide ABC transporter permease protein.
 
 0.992
Cmaq_0684
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2671 ABC transporter, permease protein.
 
 0.926
Cmaq_0696
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sto:ST2532 hypothetical peptide transporter permease protein.
 
 
 0.922
Cmaq_0802
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE3086 oligopeptide ABC transporter, permease protein.
 
 
 0.917
Cmaq_1327
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sto:ST2542 hypothetical peptide transporter ATP-binding protein.
 
 
 0.907
Cmaq_0697
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tte:TTE0227 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
 
 0.885
Cmaq_1890
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sto:ST2536 hypothetical peptide transporter ATP-binding protein.
 
 
 0.869
Cmaq_0803
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pai:PAE3317 oligopeptide transport ATP-binding protein, putative.
 
 
 0.861
Cmaq_1326
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sso:SSO2615 Dipeptide ABC transporter ATP binding protein.
 
 
 0.785
Cmaq_0456
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pis:Pisl_0562 oligopeptide/dipeptide ABC transporter, ATPase subunit.
 
 
 0.746
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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