Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1324PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2617 Dipeptide ABC transporter permease protein. (300 aa)    
Predicted Functional Partners:
Cmaq_1327
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sto:ST2542 hypothetical peptide transporter ATP-binding protein.
 
 0.995
Cmaq_1323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2618 Dipeptide ABC transporter permease protein.
 
 0.992
Cmaq_1326
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sso:SSO2615 Dipeptide ABC transporter ATP binding protein.
 
 0.988
Cmaq_0697
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tte:TTE0227 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
 0.980
Cmaq_1890
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sto:ST2536 hypothetical peptide transporter ATP-binding protein.
 
 0.979
Cmaq_0803
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pai:PAE3317 oligopeptide transport ATP-binding protein, putative.
 
 0.974
Cmaq_0695
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH299 oligopeptide ABC transporter permease protein.
 
 
 0.926
Cmaq_0145
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH299 oligopeptide ABC transporter permease protein.
 
 
 0.922
Cmaq_0801
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_0912 binding-protein-dependent transport systems inner membrane component.
 
 
 0.920
Cmaq_0683
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sto:ST2535 hypothetical peptide transporter permease protein.
 
 
 0.918
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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