Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cmaq_1350KEGG: sai:Saci_1158 hypothetical protein. (210 aa)    
Predicted Functional Partners:
Cmaq_1908
Permease; KEGG: sso:SSO3021 Permease.
  
     0.619
Cmaq_1248
PFAM: transposase IS605 OrfB; Protein of unknown function DUF1225; KEGG: sso:SSO0842 transposase ISC1476.
  
     0.611
Cmaq_0817
PFAM: amino acid permease-associated region; KEGG: sso:SSO2549 amino acid transporter, putative.
  
     0.601
Cmaq_1176
KEGG: sso:SSO1345 hypothetical protein.
  
     0.581
Cmaq_1349
PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: hbu:Hbut_0006 MazG nucleotide pyrophosphohydrolase, chain A - conserved archaeal protein.
       0.546
Cmaq_1638
PFAM: protein of unknown function DUF608; KEGG: sso:SSO2674 hypothetical protein.
  
     0.536
Cmaq_0405
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; Protein of unknown function DUF1225; KEGG: sto:ST2552 hypothetical protein.
  
     0.526
Cmaq_0859
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1361 transport membrane protein (permease).
  
     0.521
Cmaq_1276
PFAM: protein of unknown function DUF608; KEGG: sso:SSO1948 hypothetical protein.
  
     0.474
Cmaq_1494
PFAM: extracellular solute-binding protein family 5; KEGG: sto:ST2534 putative peptide transport system substrate-binding protein.
  
     0.420
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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