STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1386Beta-glucuronidase; PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sso:SSO3036 beta-glucuronidase. (558 aa)    
Predicted Functional Partners:
Cmaq_0579
PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: tpe:Tpen_1114 GHMP kinase.
 
  
 0.798
Cmaq_0237
PFAM: sulfatase; KEGG: cpf:CPF_1101 sulfatase family protein.
 
 
 0.661
Cmaq_1996
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sso:SSO2664 3-oxoacyl-(acyl carrier protein) reductase.
 
  
 0.658
Cmaq_1363
PFAM: sulfatase; KEGG: rxy:Rxyl_1235 sulfatase.
 
 
 0.656
Cmaq_1160
PFAM: Mannonate dehydratase; Xylose isomerase domain protein TIM barrel; KEGG: tvo:TVN0074 D-mannonate hydrolase.
 
  
 0.654
Cmaq_1821
PFAM: Mannonate dehydratase; HEPN domain protein; Xylose isomerase domain protein TIM barrel; KEGG: tac:Ta0753 mannonate dehydratase.
 
  
 0.654
Cmaq_1757
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sso:SSO3004 3-oxoacyl-(acyl carrier protein) reductase.
 
  
 0.647
Cmaq_0900
Beta-galactosidase; PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: rno:316033 galactosidase, beta 1 (mapped); Belongs to the glycosyl hydrolase 35 family.
 
 
 0.628
Cmaq_0054
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: llc:LACR_0824 3-oxoacyl-acyl carrier protein reductase.
  
  
 0.600
Cmaq_0518
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sai:Saci_1102 dehydrogenase.
  
  
 0.600
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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