Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mqnAConserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). (245 aa)    
Predicted Functional Partners:
Cmaq_1417
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pai:PAE1163 hypothetical protein.
 
   
 0.953
mqnC
Radical SAM domain protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).
 
   
 0.750
mqnD
Protein of unknown function DUF191; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.
 
   
 0.712
Cmaq_1550
KEGG: pai:PAE3574 hypothetical protein.
  
     0.612
Cmaq_0850
KEGG: pai:PAE3573 hypothetical protein.
  
     0.605
Cmaq_1512
SMART: AAA ATPase; KEGG: pai:PAE0128 hypothetical protein.
  
     0.566
Cmaq_0497
PFAM: FAD dependent oxidoreductase; KEGG: pis:Pisl_1612 FAD dependent oxidoreductase.
  
     0.514
Cmaq_1460
KEGG: pai:PAE0151 hypothetical protein.
  
     0.468
Cmaq_0047
PFAM: protein of unknown function DUF87; KEGG: pis:Pisl_0941 AAA ATPase.
  
     0.429
Cmaq_1125
PFAM: acylphosphatase; KEGG: pai:PAE2603 conserved protein with C terminal acylphosphatase domain.
  
     0.422
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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