STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1445PFAM: glycosyl transferase group 1; KEGG: pho:PH1844 hypothetical protein. (379 aa)    
Predicted Functional Partners:
Cmaq_1446
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tpe:Tpen_1169 NAD-dependent epimerase/dehydratase.
 
  
 0.841
Cmaq_1443
PFAM: glycosyl transferase group 1; KEGG: ape:APE_2066.1 glycosyl transferase, group 1.
 
    
0.835
Cmaq_1444
PFAM: glycosyl transferase family 2; KEGG: tvo:TVN0892 glycosyltransferase involved in cell wall biogenesis.
 
  
 0.830
Cmaq_1441
KEGG: pis:Pisl_1487 hypothetical protein.
 
    0.782
Cmaq_1440
PFAM: Archaeal PaREP1; KEGG: pai:PAE2830 paREP8.
       0.746
Cmaq_1442
KEGG: pis:Pisl_1488 hypothetical protein.
       0.746
Cmaq_1471
PFAM: glycosyl transferase group 1; KEGG: sai:Saci_1921 hypothetical protein.
  
   
 0.693
Cmaq_1434
PFAM: HEPN domain protein; KEGG: sto:ST0794 hypothetical protein.
       0.677
Cmaq_1435
PFAM: DNA polymerase beta domain protein region; KEGG: tpe:Tpen_0991 DNA polymerase, beta domain protein region.
       0.677
Cmaq_1436
Conserved hypothetical protein; KEGG: pai:PAE1271 P.aerophilum family 1964 protein.
       0.677
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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