STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Cmaq_1457PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pab:PAB2145 UDP-glucose 4-epimerase. (301 aa)    
Predicted Functional Partners:
Cmaq_1446
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tpe:Tpen_1169 NAD-dependent epimerase/dehydratase.
  
  
 
0.918
Cmaq_0546
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pai:PAE1922 UDP-glucose 4-epimerase.
  
  
 
0.917
Cmaq_1419
PFAM: NAD-dependent epimerase/dehydratase; KEGG: sso:SSO2583 sulfolipid biosynthesis protein (SqdB).
 
  
  0.917
Cmaq_0578
TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; KEGG: pfu:PF0441 galactose-1-phosphate uridylyltransferase.
  
 
 0.915
Cmaq_0561
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: pis:Pisl_0928 nucleotidyl transferase.
 
 0.905
Cmaq_1341
PFAM: Nucleotidyl transferase; KEGG: pis:Pisl_1119 nucleotidyl transferase.
 
 0.888
Cmaq_1475
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: ape:APE_1181 glucose-1-phosphate thymidylyltransferase.
 
 
 0.888
Cmaq_0529
PFAM: transferase hexapeptide repeat containing protein; KEGG: pai:PAE3024 sugar-phosphate nucleotidyl transferase.
  
 0.878
rps19
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.795
rps3
Ribosomal protein S3- domain protein; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.788
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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