Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1520Transcriptional repressor, CopY family; TIGRFAM: CRISPR locus-related DNA-binding protein; KEGG: ape:APE_1237.1 putative transcriptional regulator. (267 aa)    
Predicted Functional Partners:
Cmaq_1522
TIGRFAM: CRISPR-associated autoregulator DevR family; KEGG: hbu:Hbut_0644 conserved uncharacterized archaeal protein.
       0.740
Cmaq_1525
TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: sto:ST2639 hypothetical protein.
       0.718
Cmaq_1526
TIGRFAM: CRISPR-associated HD domain protein.
       0.718
Cmaq_1521
Hypothetical protein.
       0.557
Cmaq_1523
Hypothetical protein.
       0.512
Cmaq_1524
Hypothetical protein.
       0.512
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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