STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1537PFAM: glycoside hydrolase family 1; KEGG: pfu:PF0442 beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (399 aa)    
Predicted Functional Partners:
Cmaq_1628
Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: sso:SSO3051 alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 0.927
Cmaq_1692
Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: sai:Saci_1160 alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 0.924
Cmaq_1217
PFAM: glycoside hydrolase family 3 domain protein; PA14 domain protein; SMART: PA14-related domain protein; KEGG: xcv:XCV4337 beta-glucosidase precursor.
    
 0.920
Cmaq_1311
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tpe:Tpen_1494 glycoside hydrolase, family 3 domain protein.
    
 0.920
Cmaq_0172
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_5559 alpha-L-rhamnosidase.
    
  0.900
Cmaq_1536
TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: pis:Pisl_0680 protein-L-isoaspartate O-methyltransferase.
       0.773
Cmaq_1535
KEGG: tpe:Tpen_1405 hypothetical protein.
       0.550
Cmaq_1132
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: pis:Pisl_1102 serine/threonine protein kinase.
   
 0.455
Cmaq_1534
PFAM: PUA domain containing protein; KEGG: pai:PAE0786 conserved protein with predicted RNA binding PUA domain.
       0.452
Cmaq_0171
Alpha-amylase; PFAM: glycoside hydrolase family 57; KEGG: pis:Pisl_0969 alpha-amylase.
     
 0.440
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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