Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1634KEGG: sai:Saci_0279 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Cmaq_0897
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2468 ABC transporter, putative.
 
   
 0.812
Cmaq_1635
KEGG: pis:Pisl_0532 bacterio-opsin activator, HTH domain protein.
       0.664
Cmaq_0287
PFAM: Bacterio-opsin activator HTH domain protein; KEGG: sso:SSO1868 hypothetical protein.
  
     0.584
Cmaq_1138
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pto:PTO0380 hypothetical membrane protein.
  
     0.519
Cmaq_0896
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sto:ST0595 hypothetical ABC transporter ATP-binding protein.
 
     0.517
Cmaq_1636
TIGRFAM: conserved repeat domain; KEGG: sai:Saci_1183 conserved archaeal membrane protein.
       0.498
Cmaq_0030
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; KEGG: sso:SSO0683 hypothetical protein.
  
     0.480
Cmaq_1938
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sto:ST1666 hypothetical Rieske iron-sulfur protein.
  
     0.467
Cmaq_0603
PFAM: major facilitator superfamily MFS_1; KEGG: sto:ST1852 hypothetical multidrug resistance protein.
  
     0.461
Cmaq_1690
Hypothetical protein; KEGG: tvo:TVN0904 glycosyltransferase involved in cell wall biogenesis.
  
     0.455
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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