STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1638PFAM: protein of unknown function DUF608; KEGG: sso:SSO2674 hypothetical protein. (661 aa)    
Predicted Functional Partners:
Cmaq_0368
PFAM: protein of unknown function ATP binding; KEGG: pai:PAE3333 hypothetical protein.
    
 0.807
Cmaq_1908
Permease; KEGG: sso:SSO3021 Permease.
  
     0.669
Cmaq_1091
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sto:ST1099 hypothetical ABC transporter ATP-binding protein.
  
 
 0.638
Cmaq_1248
PFAM: transposase IS605 OrfB; Protein of unknown function DUF1225; KEGG: sso:SSO0842 transposase ISC1476.
 
     0.629
Cmaq_0859
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1361 transport membrane protein (permease).
  
     0.585
Cmaq_1061
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: sso:SSO1974 hypothetical protein.
 
     0.581
Cmaq_1176
KEGG: sso:SSO1345 hypothetical protein.
  
     0.570
Cmaq_0817
PFAM: amino acid permease-associated region; KEGG: sso:SSO2549 amino acid transporter, putative.
  
     0.562
Cmaq_1639
KEGG: sso:SSO2667 hypothetical protein.
       0.551
Cmaq_0405
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; Protein of unknown function DUF1225; KEGG: sto:ST2552 hypothetical protein.
 
     0.549
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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