STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1650KEGG: pis:Pisl_1120 hypothetical protein. (250 aa)    
Predicted Functional Partners:
Cmaq_1651
KEGG: pis:Pisl_1121 hypothetical protein.
      
0.933
Cmaq_1652
PFAM: peptidase M24; KEGG: pis:Pisl_0728 transcriptional regulator, fis family; Belongs to the peptidase M24B family.
       0.670
Cmaq_0697
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tte:TTE0227 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
  
   0.585
Cmaq_0803
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pai:PAE3317 oligopeptide transport ATP-binding protein, putative.
  
   0.585
Cmaq_1327
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sto:ST2542 hypothetical peptide transporter ATP-binding protein.
  
   0.585
Cmaq_1890
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sto:ST2536 hypothetical peptide transporter ATP-binding protein.
  
   0.585
Cmaq_1653
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: pis:Pisl_1718 myo-inositol-1-phosphate synthase.
       0.541
Cmaq_1649
TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: sai:Saci_0159 uracil DNA glycosylase superfamily protein.
       0.516
Cmaq_0802
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE3086 oligopeptide ABC transporter, permease protein.
  
 
 0.444
Cmaq_0684
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2671 ABC transporter, permease protein.
  
 
 0.436
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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