STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1654PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sai:Saci_1030 hypothetical protein. (173 aa)    
Predicted Functional Partners:
Cmaq_1655
PFAM: glycosyl transferase family 2; KEGG: pai:PAE1839 glycosyl transferase, putative.
   
   0.647
Cmaq_1653
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: pis:Pisl_1718 myo-inositol-1-phosphate synthase.
       0.555
Cmaq_1652
PFAM: peptidase M24; KEGG: pis:Pisl_0728 transcriptional regulator, fis family; Belongs to the peptidase M24B family.
  
   0.501
rps5
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.
    
 0.493
Cmaq_0427
TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: afu:AF1829 F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative.
    
 0.421
Cmaq_0428
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: afu:AF1830 F420H2:quinone oxidoreductase, 45 kDa subunit.
    
 0.402
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.