Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1671PFAM: peptidase M16 domain protein; KEGG: gvi:glr4138 probable proteinase. (415 aa)    
Predicted Functional Partners:
Cmaq_1911
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sto:ST1666 hypothetical Rieske iron-sulfur protein.
   
 0.911
Cmaq_1938
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sto:ST1666 hypothetical Rieske iron-sulfur protein.
   
 0.911
Cmaq_0304
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pas:Pars_0647 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 
 0.872
Cmaq_0428
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: afu:AF1830 F420H2:quinone oxidoreductase, 45 kDa subunit.
  
 
 0.855
Cmaq_1672
PFAM: peptidase M16 domain protein; KEGG: sfu:Sfum_3229 peptidase M16 domain protein.
 
     0.833
Cmaq_1355
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_0670 succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 
 0.801
Cmaq_1912
PFAM: Cytochrome b/b6 domain; KEGG: sto:ST1667 hypothetical cytochrome b.
    
 0.781
Cmaq_1939
PFAM: Cytochrome b/b6 domain; KEGG: sto:ST1667 hypothetical cytochrome b.
    
 0.781
Cmaq_0273
TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: afu:AF1670 adenylylsulfate reductase, subunit A.
   
 
 0.759
Cmaq_1869
TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pai:PAE0716 succinate dehydrogenase flavoprotein subunit.
   
 
 0.759
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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