Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1682PFAM: protein of unknown function DUF871; KEGG: sto:ST0866 hypothetical protein. (356 aa)    
Predicted Functional Partners:
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: pis:Pisl_1066 aspartate carbamoyltransferase.
       0.658
Cmaq_0257
PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: sto:ST2147 hypothetical protein.
  
     0.526
Cmaq_1680
PFAM: phosphoribosyltransferase; KEGG: pai:PAE3049 phosphoribosyl transferase.
       0.509
Cmaq_1683
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sto:ST0971 hypothetical sulfide dehydrogenase [flavocytochrome c] flavoprotein subunit.
       0.498
Cmaq_1144
TIGRFAM: pyridoxal phosphate-dependent enzyme, putative; KEGG: tac:Ta0673 hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.433
Cmaq_1761
PFAM: GCN5-related N-acetyltransferase; KEGG: lpl:lp_2767 acetyltransferase (putative).
  
     0.433
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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