STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1746PFAM: glycosyl transferase group 1; KEGG: pto:PTO0304 glycosyltransferase. (348 aa)    
Predicted Functional Partners:
tuf
Translation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
 
     0.534
Cmaq_1747
PFAM: tRNA intron endonuclease, catalytic-like; KEGG: mja:MJ1424 tRNA splicing endonuclease.
       0.516
Cmaq_1748
KEGG: pis:Pisl_1078 hypothetical protein.
       0.516
Cmaq_1473
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.458
Cmaq_1475
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: ape:APE_1181 glucose-1-phosphate thymidylyltransferase.
  
  
 0.447
Cmaq_1332
PFAM: glycosyl transferase group 1; KEGG: tpe:Tpen_1778 glycosyl transferase, group 1.
  
 
 0.440
Cmaq_1463
PFAM: polysaccharide biosynthesis protein; KEGG: tvo:TVN0889 membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.420
Cmaq_1476
PFAM: polysaccharide biosynthesis protein; KEGG: sso:SSO0837 polysaccharide biosynthesis related protein.
  
  
 0.420
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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