STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1772PFAM: Sterol-binding domain protein; KEGG: hch:HCH_02532 putative sterol carrier protein. (115 aa)    
Predicted Functional Partners:
Cmaq_1241
PFAM: protein of unknown function DUF35; KEGG: pai:PAE2184 conserved protein associated with acetyl-CoA C-acyltransferase.
 
 
   0.649
Cmaq_1242
KEGG: pai:PAE2183 acetyl-CoA C-acyltransferase.
   
   0.620
Cmaq_1941
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: pis:Pisl_1301 acetyl-CoA acetyltransferase.
   
   0.620
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
       0.477
Cmaq_1773
KEGG: pis:Pisl_0717 hypothetical protein.
       0.474
Cmaq_1774
PFAM: peptidase T2 asparaginase 2; KEGG: pis:Pisl_0908 peptidase T2, asparaginase 2.
       0.442
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.