STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1779PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: sai:Saci_1700 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (485 aa)    
Predicted Functional Partners:
Cmaq_0259
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sai:Saci_1939 hypothetical protein.
    
 0.961
Cmaq_1738
TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: sai:Saci_2375 isocitrate dehydrogenase.
  
 0.878
Cmaq_1071
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: sso:SSO2815 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
   
 0.834
Cmaq_0785
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sto:ST2433 hypothetical 2-oxoacid--ferredoxin oxidoreductase beta subunit.
    
 0.818
Cmaq_1072
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sto:ST2298 2-oxoglutarate ferredoxin oxidoreductase, beta subunit.
    
 0.818
Cmaq_0809
Transketolase central region; PFAM: Transketolase domain protein; Transketolase central region; KEGG: sai:Saci_0181 pyridine-binding domain transketolase.
     
 0.740
Cmaq_0931
PFAM: fumarate lyase; KEGG: sto:ST2023 fumarate hydratase.
  
 0.643
Cmaq_0626
TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: ape:APE_1618.1 aconitate hydratase.
  
 0.638
Cmaq_0306
TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; KEGG: pas:Pars_2234 2-methylcitrate synthase/citrate synthase II.
  
 0.621
mdh
Lactate/malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily.
  
 0.601
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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