Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1819PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: tvo:TVN0908 predicted carnitine dehydratase. (372 aa)    
Predicted Functional Partners:
Cmaq_1818
2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; KEGG: tvo:TVN0909 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.825
Cmaq_1817
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: tac:Ta0691 acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
 
 0.775
Cmaq_1913
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: btk:BT9727_2708 enoyl-CoA hydratase.
 
 
 0.726
Cmaq_0556
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pai:PAE2070 acyl-CoA dehydrogenase.
 
 
 0.623
Cmaq_1918
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pis:Pisl_1964 acyl-CoA dehydrogenase domain protein.
 
 0.599
Cmaq_0984
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cac:CAC3652 acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
 
 0.543
Cmaq_1170
TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pai:PAE3300 acetolactate synthase large subunit.
 
 
 0.532
Cmaq_1147
PFAM: zinc finger RanBP2-type; Ribosomal protein L40e; KEGG: tpe:Tpen_0296 ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
     
  0.488
Cmaq_1820
PFAM: Bacterio-opsin activator HTH domain protein; KEGG: tvo:TVN0906 predicted DNA-binding protein.
       0.481
Cmaq_1821
PFAM: Mannonate dehydratase; HEPN domain protein; Xylose isomerase domain protein TIM barrel; KEGG: tac:Ta0753 mannonate dehydratase.
       0.481
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.