Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1871PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: pis:Pisl_1686 orotidine 5'-phosphate decarboxylase. (217 aa)    
Predicted Functional Partners:
Cmaq_0308
PFAM: sugar isomerase (SIS); KEGG: pis:Pisl_1579 sugar isomerase (SIS).
 
 0.999
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.953
Cmaq_0610
PFAM: Dimethylmenaquinone methyltransferase; KEGG: bte:BTH_II0566 demethylmenaquinone methyltransferase.
 
    
 0.840
Cmaq_1160
PFAM: Mannonate dehydratase; Xylose isomerase domain protein TIM barrel; KEGG: tvo:TVN0074 D-mannonate hydrolase.
    
 0.816
Cmaq_1821
PFAM: Mannonate dehydratase; HEPN domain protein; Xylose isomerase domain protein TIM barrel; KEGG: tac:Ta0753 mannonate dehydratase.
    
 0.816
Cmaq_1870
KEGG: pai:PAE3324 hypothetical protein.
       0.806
Cmaq_0207
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: chy:CHY_1256 hydrolase, UxaA family.
     
  0.800
Cmaq_0208
PFAM: SAF domain protein; KEGG: chy:CHY_1255 hydrolase, UxaA family.
     
  0.800
Cmaq_1030
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2848 ABC transporter, permease (glucose).
   
    0.659
Cmaq_1869
TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pai:PAE0716 succinate dehydrogenase flavoprotein subunit.
       0.553
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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