Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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Cmaq_1879PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: pai:PAE2362 ATP-dependent helicase. (970 aa)    
Predicted Functional Partners:
Cmaq_1551
PFAM: metallophosphoesterase; KEGG: pis:Pisl_0802 metallophosphoesterase.
 
    0.584
Cmaq_1880
PFAM: protein of unknown function DUF343; KEGG: pai:PAE0284 hypothetical protein.
       0.522
Cmaq_1882
PFAM: SMC domain protein; KEGG: pai:PAE2280 hypothetical protein.
   
   0.463
lig
DNA ligase I, ATP-dependent Dnl1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
 
    0.455
Cmaq_1149
SMART: helix-turn-helix domain protein; KEGG: pai:PAE1638 putative transcriptional regulator.
  
     0.455
Cmaq_0923
Cell division control protein 6 related; Involved in regulation of DNA replication.
 
 
   0.424
Cmaq_0788
KEGG: pai:PAE3418 putative mRNA 3-end processing factor.
 
    0.423
ribK
Protein of unknown function DUF120; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
  
     0.419
Cmaq_0614
PFAM: Protein of unknown function DUF373; KEGG: pis:Pisl_1660 protein of unknown function DUF373.
  
     0.411
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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