Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1902PFAM: H+transporting two-sector ATPase C subunit; KEGG: pai:PAE0754 H+-transporting ATP synthase subunit C. (103 aa)    
Predicted Functional Partners:
Cmaq_1380
PFAM: V-type ATPase 116 kDa subunit; KEGG: pis:Pisl_1725 V-type ATPase, 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
  
 0.999
Cmaq_0210
TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit; KEGG: pai:PAE0758 H+-transporting ATP synthase subunit D.
  
 0.998
atpA
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
  
 0.998
Cmaq_0218
PFAM: H+transporting two-sector ATPase E subunit; KEGG: pis:Pisl_0706 H+-transporting two-sector ATPase, E subunit.
  
 0.998
atpB
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
 0.998
Cmaq_0508
H+-ATPase subunit C-like protein; KEGG: pai:PAE0753 H+-transporting ATP synthase subunit C.
  
 0.997
Cmaq_0219
PFAM: Vacuolar H+transporting two-sector ATPase F subunit; KEGG: pai:PAE0661 H+-transporting ATP synthase subunit F (atpF).
  
 0.992
rps14
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.
  
  
 0.914
rps11
Ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
  
 0.901
Cmaq_0322
PFAM: ribosomal protein S12/S23; SMART: Hedgehog/intein hint domain protein; KEGG: mja:MJ1042 DNA-directed RNA polymerase subunit A'.
  
  
 0.897
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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